SMDD-Bench - 2D Pharmacophore Identification: leaderboard

Metric: Success rate (%) on the 25 SMDD-Bench 2D pharmacophore identification tasks, minimalist ReAct agent harness with RDKit-style tools, 8 Boltz-2 and 15 ADMET-AI oracle calls per task, temperature 1.0, at most 100 turns; success means the submitted molecule passes the task's hidden evaluator; higher is better. Source: arxiv.org. Saturation forecast: Around 2029. 7 models tracked.

Top models

#ModelScore
1Claude Sonnet 4.628
2Gemini 3.1 Pro (Preview) (Medium)20
3MiniMax-M2.716
4Kimi K2.5 (Thinking)12
5GPT-5.4 (Medium)12
6DeepSeek V3.28
7Qwen 3.5 397B A17B4

Interactive version: theaggregate.ai/benchmark?slug=smdd-bench-2d-pharmacophore-identification · How It Works · Data refreshed daily, snapshot 2026-10-07.