Bio-VQA - Localization: leaderboard

Fine-grained biological visual QA covering taxonomy, traits, spatial reasoning and individual re-identification. Mean intersection over union. Bio-VQA v1 Table3 native headline columns,18 generalist checkpoints bound to Table13. Greedy decoding, no sampling/chain-of-thought/few-shot; one attempt per item, same prompts and scorer. Do not replace these Table3 measures with differently defined appendix headline metrics. Domain-specialist embedding baselines, Mean and Floor rows are not generic evaluated VLMs and are not admitted.

Metric: Mean intersection over union. Source: arxiv.org. Saturation forecast: Rough model projection: around 2026. 18 models tracked.

Top models

#ModelScoreOverall rank
1Qwen 3 VL 32B Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.87
2Qwen 3 VL 8B Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.86
3Qwen 3 VL 30B A3B Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.86
4InternVL3-38B-Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.74
5llava-v1.6-vicuna-7B-hf (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.7
6Gemma 4 12B (IT) (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.59
7InternVL3.5-38B-Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.41
8Gemma 3 12B (IT) (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.33
9Qwen 2.5 VL 7B Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.31
10Qwen 2.5 VL 3B Instruct (Benchmark Sweep Run: source=BioVQA; greedy; zero-shot; noCoT; single-attempt; exact Table13 checkpoint)0.31

Interactive version: theaggregate.ai/benchmark?slug=bio-vqa-localization · How It Works · Data refreshed daily, snapshot 2026-11-06.