Benchmarks.bio - VariantBench: leaderboard

VariantBench (benchmarks.bio) — agentic genetic-variant discovery and interpretation over real sequencing data (short- and long-read WGS and exome across Illumina, PacBio and ONT): small-variant, structural-variant and repeat calling with QC, statistical and population genomics, and clinical/personal genome interpretation, scored as pass rate with deterministic grading.

Metric: Pass Rate (%). Source: benchmarks.bio. Saturation forecast: Around June 2028. 15 models tracked.

Top models

#ModelScoreOverall rank
1Claude Opus 549.72#12
2GPT-6 Astra48.6#6
3Grok 4.646#26
4Claude Opus 4.842.1#37
5GPT-5.6 Sol42.1#19
6GPT-5.6 Terra38.7#41
7Claude Sonnet 538.7#57
8Grok 4.538.1#48
9Claude Opus 4.737#49
10Gemini 3.5 Flash35.3#60
11Gemini 3.1 Pro (Preview)34.5#58
12Kimi K332.8#30
13GPT-5.530.2#31
14GPT-5.6 Luna29.9#68
15Grok 4.320.3#188

No result here: #3 Claude Opus 5.5, #7 GPT-6.1 Sol, #8 Gemini 4 Argon.

Interactive version: theaggregate.ai/benchmark?slug=benchmarks-bio-variantbench · How It Works · Data refreshed daily, snapshot 2026-10-20.